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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs36016671 chr13:60795949 A/G PRAMEF16 chr1:13495254-13498260:+ 0.73 8.74 8.63E-12 Box Plot
ACC rs36799 chr5:109323314 G/A OR5V1 chr6:29323007-29399744:- -0.57 -7.88 2.0E-10 Box Plot
ACC rs368528803 chr7:17259132 T/G TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs369075 chr17:39335555 T/A OR5V1 chr6:29323007-29399744:- -0.59 -7.88 1.95E-10 Box Plot
ACC rs369292287 chr5:120325554 TAA/T GAGE2D chrX:49207160-49214420:+ 1.22 11.62 4.6E-16 Box Plot
ACC rs369496 chr17:39335388 T/C OR5V1 chr6:29323007-29399744:- -0.59 -7.88 1.95E-10 Box Plot
ACC rs370046902 chr1:119666226 AAC/AACAC PRHOXNB chr13:28552243-28562774:- 0.6 9.23 1.53E-12 Box Plot
ACC rs370859295 chr8:112846658 AACAC/A KRT14 chr17:39738531-39743173:- 1.13 7.56 6.24E-10 Box Plot
ACC rs370859295 chr8:112846658 AACAC/A KRT6C chr12:52862300-52867569:- 0.82 11.69 3.61E-16 Box Plot
ACC rs371352884 chr2:195122682 A/T PRHOXNB chr13:28552243-28562774:- 0.78 9.35 9.99E-13 Box Plot
ACC rs372189 chr17:39331971 G/A OR5V1 chr6:29323007-29399744:- -0.59 -7.88 1.95E-10 Box Plot
ACC rs372250951 chr2:107374581 ATTC/A PRAMEF16 chr1:13495254-13498260:+ 0.61 7.89 1.88E-10 Box Plot
ACC rs373520 chr17:39331662 G/A OR5V1 chr6:29323007-29399744:- -0.59 -7.88 1.95E-10 Box Plot
ACC rs374709731 chr12:27057670 CAT/C MCAT chr22:43528212-43539400:- 0.66 7.55 6.49E-10 Box Plot
ACC rs375445933 chr6:57078760 AACTGGGGAGG/A OR5V1 chr6:29323007-29399744:- 0.64 8.24 5.32E-11 Box Plot